Fix dashboards
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parent
d539a72e6a
commit
5434c7d6ef
6 changed files with 330 additions and 74 deletions
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@ -3,8 +3,10 @@ from pickle import loads
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from pathlib import Path
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from datetime import datetime
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import logging
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# from typing import Any
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from sqlmodel import Field, Relationship, String
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from matplotlib.figure import Figure
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from sqlmodel import Field, Relationship, String, JSON
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from pydantic import BaseModel
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import pandas as pd
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@ -13,12 +15,10 @@ from gisaf.models.metadata import gisaf
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from gisaf.models.models_base import Model
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from gisaf.models.misc import NotADataframeError
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import matplotlib.pyplot as plt
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logger = logging.getLogger(__name__)
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try:
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import matplotlib.pyplot as plt
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except ImportError:
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plt = None # type: ignore
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class DashboardPageSource(Model, table=True):
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@ -34,17 +34,26 @@ class DashboardPageCommon:
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Base class for DashboardPage and DashboardPageSection, where some methods
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are common, eg. attachments
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"""
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name: str
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df: bytes
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plot: bytes
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#plot: dict[str, Any] | None = Field(sa_type=JSON(none_as_null=True)) # type: ignore
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attachment: str | None
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html: str | None = None
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def get_attachment_url(self):
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## Serve through web front-end (nginx static file)
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if not self.attachment:
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return
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base_storage_url = conf.dashboard.base_storage_url
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if not base_storage_url:
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base_storage_url = '/dashboard-attachment/'
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return f'{base_storage_url}{self.group}/{self.attachment}'
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def ensure_dir_exists(self):
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raise NotImplementedError()
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def save_plot(self, plot):
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def get_plot_file_path(self) -> Path:
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raise NotImplementedError()
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def get_attachment_file_name(self) -> str:
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raise NotImplementedError()
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def get_plot_file_name(self):
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raise NotImplementedError()
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def save_plot(self, plot: plt.Axes | plt.Figure): # type: ignore
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"""
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Render the matplotlib plot (or figure) and save it in the filesystem
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:param plot: matplotlib plot or figure...
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@ -53,15 +62,14 @@ class DashboardPageCommon:
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self.ensure_dir_exists()
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## Different types of figures supported
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fig = None
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if plt:
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if isinstance(plot, plt.Axes):
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fig = plot.figure
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elif isinstance(plot, plt.Figure):
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fig = plot
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if fig:
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fig.savefig(self.get_plot_file_path(), bbox_inches='tight')
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plt.close(fig)
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fig: Figure | None = None
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if isinstance(plot, plt.Axes): # type: ignore
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fig = plot.figure # type: ignore
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elif isinstance(plot, plt.Figure): # type: ignore
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fig = plot
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if fig:
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fig.savefig(self.get_plot_file_path(), bbox_inches='tight')
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plt.close(fig)
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if plot and not fig:
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logger.warning('Cannot save dashboard attachment (unknown attachment type)')
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@ -71,7 +79,7 @@ class DashboardPageCommon:
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#f'in {self.get_attachment_file_name()}')
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return self.get_plot_file_name()
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def save_attachment(self, attached, name=None):
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def save_attachment(self, attached, name=None) -> str | None:
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"""
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Save the attachment in the filesystem
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:param attached: matplotlib plot or figure...
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@ -84,11 +92,11 @@ class DashboardPageCommon:
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self.ensure_dir_exists()
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## Different types of figures supported
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fig = None
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fig: Figure | None = None
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if plt:
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if isinstance(attached, plt.Axes):
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fig = attached.figure
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elif isinstance(attached, plt.Figure):
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if isinstance(attached, plt.Axes): # type: ignore
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fig = attached.figure # type: ignore
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elif isinstance(attached, plt.Figure): # type: ignore
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fig = attached
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if fig:
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fig.savefig(self.get_attachment_file_name(), bbox_inches='tight')
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@ -96,7 +104,7 @@ class DashboardPageCommon:
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if attached and not fig:
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logger.warning('Cannot save dashboard attachment (unknown attachment type)')
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return
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return None
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#logger.info(f'Saved attachment of dashboard page {self.group}/{self.name} '
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#f'in {self.get_attachment_file_name()}')
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@ -114,10 +122,18 @@ class DashboardPageCommon:
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raise NotADataframeError()
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def get_plot(self):
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return loads(self.plot)
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if self.plot is not None:
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return loads(self.plot)
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class DashboardPage(Model, DashboardPageCommon, table=True):
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class DashboardPageMetaData(BaseModel):
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name: str
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group: str
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description: str
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viewable_role: str | None = None
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class DashboardPage(Model, DashboardPageCommon, DashboardPageMetaData, table=True):
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__tablename__ = 'dashboard_page' # type: ignore
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__table_args__ = gisaf.table_args
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@ -125,19 +141,12 @@ class DashboardPage(Model, DashboardPageCommon, table=True):
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menu = 'Dashboard'
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id: int = Field(primary_key=True)
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name: str
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notebook: str
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group: str
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description: str
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attachment: str
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html: str
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viewable_role: str
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df: bytes
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plot: bytes
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source_id: int = Field(foreign_key=gisaf.table('dashboard_page_source.id'))
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time: datetime
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expanded_panes: str
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time: datetime | None = Field(default_factory=datetime.now)
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notebook: str | None = None
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source_id: int | None = Field(foreign_key=gisaf.table('dashboard_page_source.id'))
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expanded_panes: str | None
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source: DashboardPageSource = Relationship()
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sections: list['DashboardPageSection'] = Relationship()
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def __str__(self):
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return f'{self.group:s}/{self.name:s}'
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@ -169,6 +178,15 @@ class DashboardPage(Model, DashboardPageCommon, table=True):
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else:
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raise UserWarning('Cannot save attachment: no notebook/base_storage_dir in gisaf config')
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def get_attachment_url(self):
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## Serve through web front-end (nginx static file)
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if not self.attachment:
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return
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base_storage_url = conf.dashboard.base_storage_url
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if not base_storage_url:
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base_storage_url = '/dashboard-attachment/'
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return f'{base_storage_url}{self.group}/{self.attachment}'
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def get_notebook_url(self):
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if self.notebook:
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base_url = conf.dashboard.base_source_url
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@ -188,13 +206,9 @@ class DashboardPageSection(Model, DashboardPageCommon, table=True):
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id: str = Field(primary_key=True)
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name: str
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dashboard_page_id: int = Field(foreign_key=gisaf.table('dashboard_page.id'))
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dashboard_page: DashboardPage = Relationship()
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dashboard_page: DashboardPage = Relationship(back_populates='sections')
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description: str
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attachment: str
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html: str
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df: bytes
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plot: str
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def __str__(self):
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return f'{self.name} for dashboard page #{self.dashboard_page_id}'
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@ -266,28 +280,28 @@ class Widget(Model, table=True):
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menu = 'Dashboard'
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class DashboadPageSectionType(BaseModel):
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class DashboardSection(BaseModel):
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name: str
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plot: str
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class DashboardPage_(BaseModel):
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class Dashboard(BaseModel):
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name: str
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group: str
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description: str
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time: datetime | None = Field(default_factory=datetime.now)
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html: str | None = None
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attachment: str | None = None
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dfData: str | None = None
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dfData: list = []
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plotData: str | None = None
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notebook: str | None = None
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expandedPanes: list[str] | None = None
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sections: list[DashboadPageSectionType] | None = None
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sections: list[DashboardSection] | None = None
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class DashboardGroup(BaseModel):
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name: str
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pages: list[DashboardPage_]
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pages: list[DashboardPageMetaData]
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class DashboardHome(BaseModel):
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